Internal Fish Parasites?

I asked a question last night about my new Silver molly that had a red area under her skin that had slightly spread in the one day that I had her.

I separated her in a aerated tank but found her dead this morning:(

She was pregnant and the babies were expelled I suppose after her death. Some were not even formed yet, it's doubtful that they will even live but some are swimming around. Some are silver and some are light black colored, the silver ones you can see red so I suppose whatever she had affected her babies.

My question is, what can I use to treat the tank since I was forced to put the babies in my smaller tank which houses 3 other mollies. Will my 3 other mollies get it? Will it be safe to treat the tank even though some dont have it? what about medicated food? I've never had to deal with sick fish, any help greatly appreciated!

Update:

No no this wasnt the red of her embryos it was red around her head area.

It started around her mouth and moved up towards her eye in one day.

Then she was dead this morning leaving me a few expelled fry that were alive, but too small to have been ready to be born yet.

I got the only thing they had for internal parisites, it is from Jungle: Parasite Cure. cures internal and external parisites but I didnt see anything listed that might have caused the redness.

Update 3:

I know how to keep my gravel and fish clean I just bought the fish yesterday..

Humph.

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